RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g05840.1 View Network Show in Genome Browser |
| Other Names | Os02g0152500 |
| Description | VIL2 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 2876553-2882177 Nucleotide Length: 2250 |
| Protein-coding | LOC_Os02g05840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56880 LOC_Os01g14932 |
| Downstream Genes | LOC_Os12g05540 LOC_Os06g43640 LOC_Os11g05410 LOC_Os03g53720 LOC_Os08g43060 LOC_Os05g51500 LOC_Os03g58240 |
| Reference | |
|---|---|
| PubMed | 22973062 20644566 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g05840.1 |
| Rice Genome Annotation | LOC_Os02g05840.1 |
| Ricechip | LOC_Os02g05840.1 |
| KEGG | osa:4328327 dosa:Os02t0152500-01 |
| Entrez-Gene | 4328327 |