RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g06260.1 View Network Show in Genome Browser |
| Other Names | Os02g0157200 |
| Description | phytosulfokine receptor precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3126962-3129256 Nucleotide Length: 2157 |
| Protein-coding | LOC_Os02g06260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01800 |
| Downstream Genes | LOC_Os08g09640 LOC_Os06g38730 LOC_Os03g46600 LOC_Os06g38930 LOC_Os06g38670 LOC_Os02g11980 LOC_Os08g09450 LOC_Os06g38650 LOC_Os06g38590 LOC_Os03g11340 LOC_Os03g11360 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR393a osa-miR393b-5p |
| Reference | |
|---|---|
| PubMed | 20336383 22253868 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g06260.1 |
| Rice Genome Annotation | LOC_Os02g06260.1 |
| Ricechip | LOC_Os02g06260.1 |
| KEGG | osa:4328358 dosa:Os02t0157200-00 |
| Entrez-Gene | 4328358 |