RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g06300.1 View Network Show in Genome Browser |
| Other Names | Os02g0157700 |
| Description | GTP-binding protein lepA, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3143758-3152627 Nucleotide Length: 2019 |
| Protein-coding | LOC_Os02g06300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59790 LOC_Os01g68120 LOC_Os02g02520 LOC_Os02g01340 LOC_Os01g37560 LOC_Os01g33800 LOC_Os01g01160 LOC_Os01g37050 LOC_Os02g04170 LOC_Os01g70250 LOC_Os01g48690 More.. |
| Downstream Genes | LOC_Os03g55640 LOC_Os09g28000 LOC_Os04g51792 LOC_Os08g10649 LOC_Os10g10170 LOC_Os05g49220 LOC_Os02g16709 LOC_Os11g40500 LOC_Os05g41060 LOC_Os02g22140 LOC_Os06g13660 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g06300.1 |
| Rice Genome Annotation | LOC_Os02g06300.1 |
| Ricechip | LOC_Os02g06300.1 |
| Entrez-Gene | 9269689 |