RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g06480.1 View Network Show in Genome Browser |
| Other Names | Os02g0159850,Os02g0159700 |
| Description | SCO1 protein homolog, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3227508-3229370 Nucleotide Length: 1026 |
| Protein-coding | LOC_Os02g06480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g06470 LOC_Os01g34390 LOC_Os01g21610 LOC_Os01g42800 LOC_Os01g33030 LOC_Os01g50030 LOC_Os01g52390 LOC_Os01g13730 LOC_Os01g51380 LOC_Os01g14830 LOC_Os01g70960 More.. |
| Downstream Genes | LOC_Os09g25314 LOC_Os02g58340 LOC_Os02g55134 LOC_Os04g42010 LOC_Os09g07820 LOC_Os03g58720 LOC_Os03g22740 LOC_Os03g22730 LOC_Os03g22350 LOC_Os02g49270 LOC_Os05g49150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g06480.1 |
| Rice Genome Annotation | LOC_Os02g06480.1 |
| Ricechip | LOC_Os02g06480.1 |
| KEGG | osa:4328372 dosa:Os02t0159850-00dosa:Os02t0159700-03 |
| Entrez-Gene | 9271520 |