RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g06490.1 View Network Show in Genome Browser
Other Names	Os02g0159900
Description	vacuolar protein sorting-associated protein 4, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 3234309-3237983 Nucleotide Length: 1302
Protein-coding	LOC_Os02g06490

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005768	endosome	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g39260 LOC_Os01g66330 LOC_Os01g39250 LOC_Os01g47650 LOC_Os01g51010 LOC_Os01g51380 LOC_Os01g73230 LOC_Os01g57260 LOC_Os01g51120 LOC_Os01g37980 LOC_Os01g49900 More..
Downstream Genes	LOC_Os02g16670 LOC_Os02g24134 LOC_Os09g09480 LOC_Os07g13270 LOC_Os07g42632 LOC_Os04g48060 LOC_Os03g01810 LOC_Os03g46390 LOC_Os05g44310 LOC_Os04g11880 LOC_Os11g36390 More..

Database Links
Gramene	LOC_Os02g06490.1
Rice Genome Annotation	LOC_Os02g06490.1
Ricechip	LOC_Os02g06490.1
KEGG	osa:4328374 dosa:Os02t0159900-01
Entrez-Gene	4328374