RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g06650.1 View Network Show in Genome Browser |
| Other Names | Os02g0162000 |
| Description | COX VIIa, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3344763-3347430 Nucleotide Length: 204 |
| Protein-coding | LOC_Os02g06650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g06640 LOC_Os01g47330 LOC_Os01g40710 LOC_Os01g59990 LOC_Os01g67134 LOC_Os01g22010 LOC_Os01g19840 LOC_Os01g67000 LOC_Os01g69950 |
| Downstream Genes | LOC_Os06g46930 LOC_Os09g32532 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 LOC_Os07g26740 LOC_Os09g32520 LOC_Os10g41410 LOC_Os09g32500 LOC_Os07g46750 LOC_Os06g46770 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3781 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g06650.1 |
| Rice Genome Annotation | LOC_Os02g06650.1 |
| Ricechip | LOC_Os02g06650.1 |
| KEGG | osa:4328391 dosa:Os02t0162000-01 |
| Entrez-Gene | 4328391 |