RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g06840.1 View Network Show in Genome Browser |
| Other Names | Os02g0164300 |
| Description | galactosyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3453299-3457588 Nucleotide Length: 1203 |
| Protein-coding | LOC_Os02g06840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03160 LOC_Os01g10440 LOC_Os01g56570 |
| Downstream Genes | LOC_Os12g44240 LOC_Os05g06050 LOC_Os03g48560 LOC_Os06g40060 LOC_Os08g04790 LOC_Os03g16890 LOC_Os04g23580 LOC_Os10g30080 LOC_Os06g47150 LOC_Os02g43560 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g06840.1 |
| Rice Genome Annotation | LOC_Os02g06840.1 |
| Ricechip | LOC_Os02g06840.1 |
| KEGG | osa:4328403 dosa:Os02t0164300-02 |
| Entrez-Gene | 4328403 |