RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g07120.1 View Network Show in Genome Browser |
| Other Names | Os02g0167700 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3659093-3669323 Nucleotide Length: 3657 |
| Protein-coding | LOC_Os02g07120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27150 LOC_Os02g04660 LOC_Os01g16110 LOC_Os01g73760 |
| Downstream Genes | LOC_Os03g02540 LOC_Os05g05700 LOC_Os02g47870 LOC_Os03g60550 LOC_Os09g07820 LOC_Os02g51180 LOC_Os03g57290 LOC_Os04g55030 LOC_Os08g07400 LOC_Os12g04990 LOC_Os11g04980 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1865-5p |
| Reference | |
|---|---|
| PubMed | 20978084 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g07120.1 |
| Rice Genome Annotation | LOC_Os02g07120.1 |
| Ricechip | LOC_Os02g07120.1 |
| KEGG | osa:4328423 dosa:Os02t0167700-01 |
| Entrez-Gene | 4328423 |