RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os02g07490.1 View Network Show in Genome Browser |
Other Names | Os02g0171100 |
Description | glyceraldehyde-3-phosphate dehydrogenase, putative, expressed |
Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3868113-3872945 Nucleotide Length: 1236 |
Protein-coding | LOC_Os02g07490 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0009908 | flower development | Biological Process | IEA | |
GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
GO:0008152 | metabolic process | Biological Process | IEA | |
GO:0007275 | multicellular organismal development | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0003824 | catalytic activity | Molecular Function | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os02g07260 LOC_Os01g58610 LOC_Os02g07060 LOC_Os01g59150 LOC_Os01g18050 LOC_Os01g62420 LOC_Os01g73310 LOC_Os01g59500 LOC_Os01g62290 LOC_Os01g64490 LOC_Os01g15260 More.. |
Downstream Genes | LOC_Os04g46560 LOC_Os06g45710 LOC_Os05g41640 LOC_Os03g56810 LOC_Os06g46000 LOC_Os11g14220 LOC_Os03g51600 LOC_Os03g01530 LOC_Os05g34170 LOC_Os10g30550 LOC_Os05g13950 More.. |
miRNA Regulations | |
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miRNAs | osa-miR444d.3 |
Pathways | |
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KEGG Pathways | rn00300 rn01100 rn01110 rn01120 rn00010 rn00710 |
Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 P124-PWY ANAEROFRUCAT-PWY GLUCONEO-PWY PWY-1042 PWY-3801 GLYCOLYSIS |
Database Links | |
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Gramene | LOC_Os02g07490.1 |
Rice Genome Annotation | LOC_Os02g07490.1 |
Ricechip | LOC_Os02g07490.1 |
KEGG | osa:4328446 dosa:Os02t0171100-01 |
Entrez-Gene | 4328446 |