RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g07630.1 View Network Show in Genome Browser |
| Other Names | Os02g0172600 |
| Description | copper-transporting ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 3950378-3955899 Nucleotide Length: 3039 |
| Protein-coding | LOC_Os02g07630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g66240 LOC_Os01g59110 LOC_Os01g53420 LOC_Os01g53380 LOC_Os01g53350 LOC_Os01g53370 LOC_Os01g53390 LOC_Os01g50200 LOC_Os01g55320 LOC_Os01g53330 LOC_Os01g53430 More.. |
| Downstream Genes | LOC_Os08g10480 LOC_Os04g48410 LOC_Os06g37080 LOC_Os09g20090 LOC_Os06g37150 LOC_Os09g32952 LOC_Os06g29380 LOC_Os04g48930 LOC_Os04g36720 LOC_Os05g33390 LOC_Os02g32814 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g07630.1 |
| Rice Genome Annotation | LOC_Os02g07630.1 |
| Ricechip | LOC_Os02g07630.1 |
| KEGG | osa:4328448 dosa:Os02t0172600-00 |
| Entrez-Gene | 4328448 |