RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g07720.3 View Network Show in Genome Browser |
| Other Names | Os02g0173500 |
| Description | cytidylyltransferase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4024680-4028689 Nucleotide Length: 774 |
| Protein-coding | LOC_Os02g07720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50030 LOC_Os01g73310 LOC_Os01g14950 LOC_Os01g21610 LOC_Os01g70580 LOC_Os02g01510 LOC_Os02g04120 LOC_Os01g24060 LOC_Os01g72940 LOC_Os01g19840 LOC_Os01g50616 More.. |
| Downstream Genes | LOC_Os02g56980 LOC_Os07g08210 LOC_Os03g59020 LOC_Os05g05470 LOC_Os03g42220 LOC_Os09g17870 LOC_Os05g06350 LOC_Os05g48290 LOC_Os11g03050 LOC_Os12g02820 LOC_Os05g01600 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR529b |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g07720.3 |
| Rice Genome Annotation | LOC_Os02g07720.3 |
| Ricechip | LOC_Os02g07720.3 |
| KEGG | osa:4328455 dosa:Os02t0173500-01 |
| Entrez-Gene | 4328455 |