RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g07760.2 View Network Show in Genome Browser |
| Other Names | Os02g0173900 |
| Description | aldehyde dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4044578-4052438 Nucleotide Length: 1482 |
| Protein-coding | LOC_Os02g07760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42234 LOC_Os01g56930 LOC_Os01g12800 LOC_Os01g62900 LOC_Os01g71720 LOC_Os01g71700 LOC_Os01g71710 LOC_Os01g71760 LOC_Os01g71740 LOC_Os02g06640 LOC_Os01g40860 More.. |
| Downstream Genes | LOC_Os10g40570 LOC_Os06g15990 LOC_Os08g36530 LOC_Os05g38150 LOC_Os02g21460 LOC_Os11g08300 LOC_Os02g49720 LOC_Os10g42250 LOC_Os08g36320 LOC_Os03g51080 LOC_Os07g32800 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g07760.2 |
| Rice Genome Annotation | LOC_Os02g07760.2 |
| Ricechip | LOC_Os02g07760.2 |
| KEGG | osa:9267109 dosa:Os02t0173900-01 |
| Entrez-Gene | 9267109 |