RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g07840.1 View Network Show in Genome Browser |
| Other Names | Os02g0175100 |
| Description | bZIP transcription factor domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4109770-4112884 Nucleotide Length: 837 |
| Protein-coding | LOC_Os02g07840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03960 LOC_Os01g59350 LOC_Os01g64020 LOC_Os01g48820 LOC_Os01g56420 |
| Downstream Genes | LOC_Os12g37410 LOC_Os04g54474 LOC_Os03g51030 LOC_Os06g14530 LOC_Os03g41080 LOC_Os06g24540 LOC_Os10g35670 LOC_Os12g01449 LOC_Os11g01439 LOC_Os09g17620 LOC_Os06g02019 More.. |
| Reference | |
|---|---|
| PubMed | 18065552 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g07840.1 |
| Rice Genome Annotation | LOC_Os02g07840.1 |
| Ricechip | LOC_Os02g07840.1 |
| KEGG | osa:4328469 dosa:Os02t0175100-01 |
| Entrez-Gene | 4328469 |