RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g07960.3 View Network Show in Genome Browser |
| Other Names | Os02g0176100 |
| Description | STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4165323-4175212 Nucleotide Length: 2388 |
| Protein-coding | LOC_Os02g07960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os01g19130 LOC_Os01g49330 LOC_Os01g40094 LOC_Os01g70580 LOC_Os01g25440 LOC_Os01g43100 LOC_Os01g74190 LOC_Os02g04080 LOC_Os02g04040 LOC_Os01g32964 More.. |
| Downstream Genes | LOC_Os06g48300 LOC_Os04g56450 LOC_Os06g33549 LOC_Os07g32380 LOC_Os02g15594 LOC_Os02g55560 LOC_Os04g37904 LOC_Os06g44210 LOC_Os10g39540 LOC_Os06g33530 LOC_Os04g52000 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6248 osa-miR812f osa-miR812g osa-miR812h osa-miR812i osa-miR812j osa-miR812p
|
| Database Links | |
|---|---|
| Gramene | LOC_Os02g07960.3 |
| Rice Genome Annotation | LOC_Os02g07960.3 |
| Ricechip | LOC_Os02g07960.3 |
| KEGG | osa:4328477 dosa:Os02t0176100-02 |
| Entrez-Gene | 4328477 |