RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g08130.1 View Network Show in Genome Browser |
| Other Names | Os02g0177900 |
| Description | FGGY family of carbohydrate kinases, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4302073-4309655 Nucleotide Length: 1734 |
| Protein-coding | LOC_Os02g08130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04870 LOC_Os01g03090 LOC_Os01g08560 LOC_Os02g02410 LOC_Os01g62290 LOC_Os01g49250 LOC_Os01g52790 LOC_Os02g02750 |
| Downstream Genes | LOC_Os07g44660 LOC_Os03g36730 LOC_Os07g22650 LOC_Os09g02810 LOC_Os04g55410 LOC_Os12g43664 LOC_Os08g39300 LOC_Os03g16920 LOC_Os03g02260 LOC_Os02g48110 LOC_Os02g53420 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00561 rn01100 |
| Metacyc Pathways | PWY0-381 PWY-4261 PWY-4041 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g08130.1 |
| Rice Genome Annotation | LOC_Os02g08130.1 |
| Ricechip | LOC_Os02g08130.1 |
| KEGG | osa:4328488 dosa:Os02t0177900-01 |
| Entrez-Gene | 4328488 |