RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g08140.1 View Network Show in Genome Browser |
| Other Names | Os02g0178000 |
| Description | CAMK_KIN1/SNF1/Nim1_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4306572-4310096 Nucleotide Length: 1311 |
| Protein-coding | LOC_Os02g08140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os01g49330 LOC_Os01g70580 LOC_Os01g25440 LOC_Os01g40094 LOC_Os01g28680 LOC_Os01g19130 |
| Downstream Genes | LOC_Os07g32380 LOC_Os06g48300 LOC_Os04g52000 LOC_Os04g56450 LOC_Os06g44210 LOC_Os02g15594 LOC_Os04g37904 LOC_Os09g30100 LOC_Os03g18150 LOC_Os02g55560 LOC_Os06g33549 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR528-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g08140.1 |
| Rice Genome Annotation | LOC_Os02g08140.1 |
| Ricechip | LOC_Os02g08140.1 |
| KEGG | osa:4328489 dosa:Os02t0178000-01 |
| Entrez-Gene | 4328489 |