RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g08260.1 View Network Show in Genome Browser |
| Other Names | Os02g0179100 |
| Description | HD domain containing protein 2, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4384188-4388042 Nucleotide Length: 687 |
| Protein-coding | LOC_Os02g08260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01920 LOC_Os01g33050 LOC_Os01g69970 LOC_Os01g42470 LOC_Os01g51620 LOC_Os01g04260 LOC_Os01g08770 LOC_Os01g71230 LOC_Os01g13730 LOC_Os01g07080 LOC_Os01g56600 More.. |
| Downstream Genes | LOC_Os07g33340 LOC_Os05g41100 LOC_Os07g34740 LOC_Os05g01990 LOC_Os05g05220 LOC_Os04g43140 LOC_Os03g25450 LOC_Os10g31520 LOC_Os03g22160 LOC_Os08g31810 LOC_Os12g04010 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g08260.1 |
| Rice Genome Annotation | LOC_Os02g08260.1 |
| Ricechip | LOC_Os02g08260.1 |
| KEGG | osa:4328498 dosa:Os02t0179100-01 |
| Entrez-Gene | 4328498 |