RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g08300.2 View Network Show in Genome Browser |
| Other Names | Os02g0179300 |
| Description | RAD23 DNA repair protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4407958-4412805 Nucleotide Length: 1110 |
| Protein-coding | LOC_Os02g08300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70140 LOC_Os01g16330 LOC_Os01g49680 LOC_Os01g63250 LOC_Os01g04870 LOC_Os02g01030 LOC_Os02g03340 LOC_Os01g08200 LOC_Os01g57110 LOC_Os02g06640 LOC_Os01g68950 More.. |
| Downstream Genes | LOC_Os03g13970 LOC_Os08g33082 LOC_Os02g10510 LOC_Os10g39620 LOC_Os08g25060 LOC_Os02g58220 LOC_Os04g35900 LOC_Os04g58350 LOC_Os05g33850 LOC_Os04g55150 LOC_Os02g43020 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g08300.2 |
| Rice Genome Annotation | LOC_Os02g08300.2 |
| Ricechip | LOC_Os02g08300.2 |
| KEGG | osa:4328500 dosa:Os02t0179300-01 |
| Entrez-Gene | 4328500 |