RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g08440.1 View Network Show in Genome Browser |
| Other Names | Os02g0181300 |
| Description | WRKY71, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4542762-4544983 Nucleotide Length: 1047 |
| Protein-coding | LOC_Os02g08440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64360 LOC_Os01g70790 LOC_Os01g50420 LOC_Os01g38980 LOC_Os01g50410 LOC_Os01g28790 LOC_Os01g66270 LOC_Os01g57470 LOC_Os01g61080 |
| Downstream Genes | LOC_Os06g46950 LOC_Os06g44010 LOC_Os03g53020 LOC_Os05g27730 LOC_Os08g37660 LOC_Os03g08330 LOC_Os10g39090 LOC_Os03g01740 LOC_Os10g25230 LOC_Os04g43680 LOC_Os02g15810 More.. |
| Reference | |
|---|---|
| PubMed | 15047897 15618416 18175928 16623886 21961049 16919842 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g08440.1 |
| Rice Genome Annotation | LOC_Os02g08440.1 |
| Ricechip | LOC_Os02g08440.1 |
| KEGG | osa:4328512 dosa:Os02t0181300-01 |
| Entrez-Gene | 4328512 |