RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g08480.1 View Network Show in Genome Browser |
| Other Names | Os02g0181800 |
| Description | ubiquitin fusion degradation protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4563050-4566686 Nucleotide Length: 948 |
| Protein-coding | LOC_Os02g08480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42850 LOC_Os01g16146 LOC_Os01g34480 LOC_Os01g12800 LOC_Os01g71300 LOC_Os01g56670 LOC_Os01g27990 LOC_Os01g74000 LOC_Os01g68950 LOC_Os01g68940 LOC_Os01g40660 More.. |
| Downstream Genes | LOC_Os04g39040 LOC_Os02g26814 LOC_Os02g16550 LOC_Os03g05730 LOC_Os07g25420 LOC_Os10g30580 LOC_Os07g49150 LOC_Os04g46930 LOC_Os06g43570 LOC_Os03g18690 LOC_Os02g47940 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g08480.1 |
| Rice Genome Annotation | LOC_Os02g08480.1 |
| Ricechip | LOC_Os02g08480.1 |
| KEGG | osa:4328514 dosa:Os02t0181800-01 |
| Entrez-Gene | 4328514 |