RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g08490.1 View Network Show in Genome Browser |
| Other Names | Os02g0181900 |
| Description | chaperone protein clpB 1, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4567617-4573049 Nucleotide Length: 2952 |
| Protein-coding | LOC_Os02g08490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39260 LOC_Os01g53070 LOC_Os01g62040 LOC_Os01g56600 LOC_Os02g07870 LOC_Os02g03100 LOC_Os01g62290 LOC_Os01g46380 LOC_Os01g12800 LOC_Os01g19260 |
| Downstream Genes | LOC_Os04g40290 LOC_Os03g14280 LOC_Os12g07720 LOC_Os02g21970 LOC_Os02g35630 LOC_Os02g19150 LOC_Os06g06190 LOC_Os04g42110 LOC_Os07g48960 LOC_Os02g53420 LOC_Os03g25050 More.. |
| Reference | |
|---|---|
| PubMed | 20141629 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g08490.1 |
| Rice Genome Annotation | LOC_Os02g08490.1 |
| Ricechip | LOC_Os02g08490.1 |
| KEGG | osa:4328515 dosa:Os02t0181900-01 |
| Entrez-Gene | 4328515 |