RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g09120.1 View Network Show in Genome Browser |
| Other Names | Os02g0183900 |
| Description | isoleucyl-tRNA synthetase, cytoplasmic, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 4676850-4679925 Nucleotide Length: 1092 |
| Protein-coding | LOC_Os02g09120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g09100 |
| Downstream Genes | LOC_Os03g58710 LOC_Os04g56970 LOC_Os03g44420 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00970 rn00450 |
| Metacyc Pathways | TRNA-CHARGING-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g09120.1 |
| Rice Genome Annotation | LOC_Os02g09120.1 |
| Ricechip | LOC_Os02g09120.1 |
| KEGG | osa:9268435 dosa:Os02t0183900-00 |
| Entrez-Gene | 9268435 |