RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g09940.1 View Network Show in Genome Browser |
| Other Names | Os02g0192700 |
| Description | peroxiredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 5166991-5168040 Nucleotide Length: 678 |
| Protein-coding | LOC_Os02g09940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59790 LOC_Os01g16030 LOC_Os01g47340 LOC_Os01g66280 LOC_Os01g63270 |
| Downstream Genes | LOC_Os04g30890 LOC_Os05g41060 LOC_Os03g59740 LOC_Os02g33450 LOC_Os07g44430 LOC_Os07g44440 LOC_Os11g18170 LOC_Os02g44500 LOC_Os07g12200 LOC_Os07g12170 LOC_Os05g31290 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g09940.1 |
| Rice Genome Annotation | LOC_Os02g09940.1 |
| Ricechip | LOC_Os02g09940.1 |
| KEGG | osa:4328586 dosa:Os02t0192700-02 |
| Entrez-Gene | 4328586 |