RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g09990.1 View Network Show in Genome Browser |
| Other Names | Os02g0193300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 5193974-5195290 Nucleotide Length: 579 |
| Protein-coding | LOC_Os02g09990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70790 LOC_Os01g17050 LOC_Os01g63690 |
| Downstream Genes | LOC_Os04g46240 LOC_Os02g43820 LOC_Os04g34140 LOC_Os02g33680 LOC_Os04g46250 LOC_Os09g37080 LOC_Os09g25760 LOC_Os04g48850 LOC_Os03g58010 LOC_Os05g47650 LOC_Os06g11510 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2922 osa-miR1439 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g09990.1 |
| Rice Genome Annotation | LOC_Os02g09990.1 |
| Ricechip | LOC_Os02g09990.1 |
| KEGG | osa:4328591 dosa:Os02t0193300-01 |
| Entrez-Gene | 4328591 |