RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g10060.1 View Network Show in Genome Browser |
| Other Names | Os02g0194000 |
| Description | SWIRM domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 5238182-5242116 Nucleotide Length: 1536 |
| Protein-coding | LOC_Os02g10060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02290 LOC_Os01g32750 LOC_Os01g64640 LOC_Os01g51380 LOC_Os01g43030 LOC_Os01g47540 LOC_Os01g55040 LOC_Os01g54870 LOC_Os01g62040 LOC_Os01g61920 LOC_Os01g59730 More.. |
| Downstream Genes | LOC_Os05g05230 LOC_Os02g49190 LOC_Os03g53960 LOC_Os04g01970 LOC_Os04g54340 LOC_Os09g39420 LOC_Os08g04780 LOC_Os10g38850 LOC_Os04g47270 LOC_Os02g51880 LOC_Os03g10570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g10060.1 |
| Rice Genome Annotation | LOC_Os02g10060.1 |
| Ricechip | LOC_Os02g10060.1 |
| KEGG | osa:4328597 dosa:Os02t0194000-01 |
| Entrez-Gene | 4328597 |