RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g10260.2 View Network Show in Genome Browser |
| Other Names | Os02g0196300 |
| Description | outer membrane protein, OMP85 family protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 5376079-5380164 Nucleotide Length: 1416 |
| Protein-coding | LOC_Os02g10260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52400 LOC_Os01g54900 LOC_Os01g63830 LOC_Os01g73450 LOC_Os01g55360 LOC_Os02g03460 |
| Downstream Genes | LOC_Os05g36000 LOC_Os08g12840 LOC_Os03g38230 LOC_Os05g39390 LOC_Os06g07120 LOC_Os07g04200 LOC_Os07g41680 LOC_Os04g41300 LOC_Os04g33300 LOC_Os12g35630 LOC_Os08g25290 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g10260.2 |
| Rice Genome Annotation | LOC_Os02g10260.2 |
| Ricechip | LOC_Os02g10260.2 |
| KEGG | osa:4328615 dosa:Os02t0196300-01 |
| Entrez-Gene | 4328615 |