RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g10310.1 View Network Show in Genome Browser |
| Other Names | Os02g0196800 |
| Description | fumarylacetoacetase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 5414913-5418208 Nucleotide Length: 1290 |
| Protein-coding | LOC_Os02g10310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53420 LOC_Os01g53380 LOC_Os02g07490 LOC_Os01g53370 LOC_Os01g67860 LOC_Os01g53450 |
| Downstream Genes | LOC_Os11g14040 LOC_Os06g01360 LOC_Os03g25260 LOC_Os03g61330 LOC_Os02g35590 LOC_Os12g10720 LOC_Os12g10730 LOC_Os09g26700 LOC_Os12g35360 LOC_Os05g24550 LOC_Os04g57440 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00350 rn00643 rn01100 rn01120 |
| Metacyc Pathways | TYRFUMCAT-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g10310.1 |
| Rice Genome Annotation | LOC_Os02g10310.1 |
| Ricechip | LOC_Os02g10310.1 |
| KEGG | osa:4328618 dosa:Os02t0196800-01 |
| Entrez-Gene | 4328618 |