RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g10780.1 View Network Show in Genome Browser |
| Other Names | Os02g0202200 |
| Description | SPX domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 5706636-5709127 Nucleotide Length: 843 |
| Protein-coding | LOC_Os02g10780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40340 LOC_Os01g65220 LOC_Os01g66520 LOC_Os01g43020 LOC_Os01g07730 LOC_Os01g02000 LOC_Os01g74152 LOC_Os02g07720 |
| Downstream Genes | LOC_Os07g10350 LOC_Os10g25110 LOC_Os05g01310 LOC_Os06g40120 LOC_Os03g61200 LOC_Os11g19250 LOC_Os04g52200 LOC_Os05g51490 LOC_Os03g22890 LOC_Os05g22920 LOC_Os02g50370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g10780.1 |
| Rice Genome Annotation | LOC_Os02g10780.1 |
| Ricechip | LOC_Os02g10780.1 |
| KEGG | osa:4328654 dosa:Os02t0202200-01 |
| Entrez-Gene | 4328654 |