RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g11780.1 View Network Show in Genome Browser |
| Other Names | Os02g0208600 |
| Description | transcription factor S-II, central domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6083116-6089638 Nucleotide Length: 3360 |
| Protein-coding | LOC_Os02g11780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56000 |
| Downstream Genes | LOC_Os09g34070 LOC_Os09g12730 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g11780.1 |
| Rice Genome Annotation | LOC_Os02g11780.1 |
| Ricechip | LOC_Os02g11780.1 |
| KEGG | osa:4328690 dosa:Os02t0208600-01 |
| Entrez-Gene | 4328690 |