RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g11820.3 View Network Show in Genome Browser |
| Other Names | Os02g0208900 |
| Description | GTPase-activating protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6110092-6118738 Nucleotide Length: 1635 |
| Protein-coding | LOC_Os02g11820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08450 LOC_Os01g02040 |
| Downstream Genes | LOC_Os06g51250 LOC_Os09g33600 LOC_Os02g42134 LOC_Os03g63710 LOC_Os10g42420 LOC_Os02g43690 LOC_Os02g49050 LOC_Os03g03830 LOC_Os03g14260 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g11820.3 |
| Rice Genome Annotation | LOC_Os02g11820.3 |
| Ricechip | LOC_Os02g11820.3 |
| KEGG | osa:4328692 dosa:Os02t0208900-01 |
| Entrez-Gene | 4328692 |