RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g12310.1 View Network Show in Genome Browser |
| Other Names | Os02g0214500 |
| Description | no apical meristem protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6404018-6405879 Nucleotide Length: 759 |
| Protein-coding | LOC_Os02g12310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67310 LOC_Os01g55690 LOC_Os01g44220 |
| Downstream Genes | LOC_Os07g42390 LOC_Os02g25640 LOC_Os05g26400 LOC_Os05g26386 LOC_Os05g26377 LOC_Os05g26368 LOC_Os05g26359 LOC_Os05g26350 LOC_Os07g12080 LOC_Os03g07226 LOC_Os07g10580 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172d-5p |
| Reference | |
|---|---|
| PubMed | 15029955 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g12310.1 |
| Rice Genome Annotation | LOC_Os02g12310.1 |
| Ricechip | LOC_Os02g12310.1 |
| KEGG | osa:4328715 dosa:Os02t0214500-01 |
| Entrez-Gene | 4328715 |