RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os02g12380.3 View Network Show in Genome Browser
Other Names	Os02g0215200
Description	histone deacetylase, putative, expressed
Gene Attributes	Chromosome: Chr2 CDS Coordinates (5'-3'): 6447078-6453173 Nucleotide Length: 1497
Protein-coding	LOC_Os02g12380

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g55200 LOC_Os01g45990 LOC_Os01g11250 LOC_Os02g07830 LOC_Os01g52070 LOC_Os01g27040 LOC_Os01g04870 LOC_Os02g02960 LOC_Os01g01960 LOC_Os01g25370 LOC_Os01g58680 More..
Downstream Genes	LOC_Os08g25200 LOC_Os04g01130 LOC_Os11g34300 LOC_Os03g43890 LOC_Os07g06980 LOC_Os07g38360 LOC_Os06g08480 LOC_Os02g56130 LOC_Os02g14840 LOC_Os11g32900 LOC_Os12g07720 More..

Database Links
Gramene	LOC_Os02g12380.3
Rice Genome Annotation	LOC_Os02g12380.3
Ricechip	LOC_Os02g12380.3
KEGG	osa:4328720 dosa:Os02t0215200-02
Entrez-Gene	4328720