RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g12580.1 View Network Show in Genome Browser |
| Other Names | Os02g0217600 |
| Description | OsPP2Ac-3 - Phosphatase 2A isoform 3 belonging to family 1, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6572759-6577608 Nucleotide Length: 924 |
| Protein-coding | LOC_Os02g12580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08310 LOC_Os01g41630 LOC_Os02g02960 LOC_Os02g04320 LOC_Os01g66920 LOC_Os01g71270 LOC_Os01g58640 LOC_Os01g38970 LOC_Os01g53900 LOC_Os01g23380 LOC_Os01g52470 More.. |
| Downstream Genes | LOC_Os09g07510 LOC_Os11g15570 LOC_Os04g33470 LOC_Os11g38900 LOC_Os06g36770 LOC_Os02g36710 LOC_Os03g49580 LOC_Os11g26910 LOC_Os09g36830 LOC_Os02g13110 LOC_Os04g42600 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Reference | |
|---|---|
| PubMed | 10080713 12602862 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g12580.1 |
| Rice Genome Annotation | LOC_Os02g12580.1 |
| Ricechip | LOC_Os02g12580.1 |
| KEGG | osa:4328734 dosa:Os02t0217600-01 |
| Entrez-Gene | 4328734 |