RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g12650.1 View Network Show in Genome Browser |
| Other Names | Os02g0218200 |
| Description | puromycin-sensitive aminopeptidase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6599222-6606542 Nucleotide Length: 2637 |
| Protein-coding | LOC_Os02g12650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67590 LOC_Os01g17330 LOC_Os01g16190 LOC_Os01g17430 LOC_Os01g55820 LOC_Os02g10640 LOC_Os02g05340 LOC_Os01g40470 LOC_Os01g51220 LOC_Os01g28450 LOC_Os02g07760 More.. |
| Downstream Genes | LOC_Os10g08550 LOC_Os06g04510 LOC_Os07g44620 LOC_Os03g14450 LOC_Os05g28510 LOC_Os06g09170 LOC_Os04g40650 LOC_Os08g10450 LOC_Os10g33770 LOC_Os02g50230 LOC_Os02g45650 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 rn01100 |
| Metacyc Pathways | PWY-4041 PWY-4061 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g12650.1 |
| Rice Genome Annotation | LOC_Os02g12650.1 |
| Ricechip | LOC_Os02g12650.1 |
| KEGG | osa:4328737 dosa:Os02t0218200-01 |
| Entrez-Gene | 4328737 |