RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g12740.1 View Network Show in Genome Browser |
| Other Names | Os02g0219400 |
| Description | GPI-anchor transamidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6668822-6672950 Nucleotide Length: 1215 |
| Protein-coding | LOC_Os02g12740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48980 LOC_Os01g67960 LOC_Os01g64990 LOC_Os01g62620 LOC_Os01g42430 LOC_Os01g07730 LOC_Os01g38670 LOC_Os01g05670 LOC_Os01g38680 LOC_Os01g69210 LOC_Os02g03450 More.. |
| Downstream Genes | LOC_Os11g28980 LOC_Os02g46350 LOC_Os02g49590 LOC_Os08g25624 LOC_Os05g15160 LOC_Os05g07870 LOC_Os03g60700 LOC_Os05g38360 LOC_Os03g26090 LOC_Os05g45310 LOC_Os06g06410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g12740.1 |
| Rice Genome Annotation | LOC_Os02g12740.1 |
| Ricechip | LOC_Os02g12740.1 |
| KEGG | osa:4328747 dosa:Os02t0219400-01 |
| Entrez-Gene | 4328747 |