RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g12794.3 View Network Show in Genome Browser |
| Other Names | Os02g0220500 |
| Description | elongation factor 1-gamma, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6716994-6720424 Nucleotide Length: 759 |
| Protein-coding | LOC_Os02g12794 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67134 LOC_Os01g53900 LOC_Os01g27630 LOC_Os01g04730 LOC_Os01g16890 LOC_Os01g64090 LOC_Os01g59730 LOC_Os01g61814 LOC_Os01g52470 LOC_Os01g22490 LOC_Os01g59990 More.. |
| Downstream Genes | LOC_Os04g02820 LOC_Os07g08660 LOC_Os02g32030 LOC_Os03g58430 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os08g13690 LOC_Os04g51630 LOC_Os12g38000 LOC_Os09g02700 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g12794.3 |
| Rice Genome Annotation | LOC_Os02g12794.3 |
| Ricechip | LOC_Os02g12794.3 |
| KEGG | osa:4328752 dosa:Os02t0220500-01 |
| Entrez-Gene | 4328752 |