RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g12880.5 View Network Show in Genome Browser |
| Other Names | Os02g0221800 |
| Description | calcium-binding EF hand family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6798730-6802471 Nucleotide Length: 903 |
| Protein-coding | LOC_Os02g12880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16010 LOC_Os02g03340 |
| Downstream Genes | LOC_Os05g23950 LOC_Os02g39290 LOC_Os04g14190 LOC_Os02g55880 LOC_Os12g08070 LOC_Os04g14110 LOC_Os04g14654 LOC_Os02g53500 LOC_Os03g55200 LOC_Os07g27450 LOC_Os03g54091 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g12880.5 |
| Rice Genome Annotation | LOC_Os02g12880.5 |
| Ricechip | LOC_Os02g12880.5 |
| KEGG | osa:4328760 dosa:Os02t0221800-00 |
| Entrez-Gene | 4328760 |