RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g13130.1 View Network Show in Genome Browser |
| Other Names | Os02g0224300 |
| Description | KH domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 6979511-6985051 Nucleotide Length: 2100 |
| Protein-coding | LOC_Os02g13130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70060 LOC_Os01g66730 LOC_Os01g47256 LOC_Os01g43170 LOC_Os02g03890 |
| Downstream Genes | LOC_Os06g07896 LOC_Os02g55940 LOC_Os03g63670 LOC_Os12g07730 LOC_Os04g47590 LOC_Os03g38000 LOC_Os07g41750 LOC_Os11g08080 LOC_Os04g43922 LOC_Os07g06820 LOC_Os04g48700 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5493 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g13130.1 |
| Rice Genome Annotation | LOC_Os02g13130.1 |
| Ricechip | LOC_Os02g13130.1 |
| KEGG | osa:4328770 dosa:Os02t0224300-01 |
| Entrez-Gene | 4328770 |