RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g13560.3 View Network Show in Genome Browser |
| Other Names | Os02g0229400 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 7273397-7278272 Nucleotide Length: 2241 |
| Protein-coding | LOC_Os02g13560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63270 LOC_Os01g53240 LOC_Os01g43910 |
| Downstream Genes | LOC_Os06g21950 LOC_Os09g25900 LOC_Os11g05390 LOC_Os04g51330 LOC_Os12g15470 LOC_Os09g15340 LOC_Os12g02120 LOC_Os04g52230 LOC_Os11g02180 LOC_Os08g38820 LOC_Os07g40620 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5150-3p |
| Reference | |
|---|---|
| PubMed | 20202129 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g13560.3 |
| Rice Genome Annotation | LOC_Os02g13560.3 |
| Ricechip | LOC_Os02g13560.3 |
| KEGG | osa:4328798 dosa:Os02t0229400-01 |
| Entrez-Gene | 4328798 |