RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g14130.1 View Network Show in Genome Browser |
| Other Names | Os02g0236200 |
| Description | CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 7718903-7723687 Nucleotide Length: 1206 |
| Protein-coding | LOC_Os02g14130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os01g69130 LOC_Os01g68680 LOC_Os02g11060 LOC_Os01g51450 LOC_Os01g33030 LOC_Os02g08364 LOC_Os02g05310 LOC_Os01g09200 LOC_Os01g19450 LOC_Os01g40094 More.. |
| Downstream Genes | LOC_Os04g37904 LOC_Os06g33549 LOC_Os06g48300 LOC_Os07g32380 LOC_Os06g33530 LOC_Os03g49730 LOC_Os06g05660 LOC_Os04g56450 LOC_Os02g15594 LOC_Os02g55560 LOC_Os04g52000 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g14130.1 |
| Rice Genome Annotation | LOC_Os02g14130.1 |
| Ricechip | LOC_Os02g14130.1 |
| KEGG | osa:4328830 dosa:Os02t0236200-01 |
| Entrez-Gene | 4328830 |