RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g15550.3 View Network Show in Genome Browser |
| Other Names | Os02g0254700 |
| Description | spermidine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 8726612-8730661 Nucleotide Length: 978 |
| Protein-coding | LOC_Os02g15550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12570 LOC_Os01g52790 LOC_Os01g49250 LOC_Os01g40660 LOC_Os01g43710 LOC_Os01g12560 LOC_Os01g43750 LOC_Os01g43700 LOC_Os01g43774 LOC_Os01g41820 LOC_Os01g43740 More.. |
| Downstream Genes | LOC_Os07g22600 LOC_Os09g37120 LOC_Os04g42090 LOC_Os02g39790 LOC_Os10g38850 LOC_Os09g25620 LOC_Os06g19680 LOC_Os04g04980 LOC_Os10g17280 LOC_Os03g63490 LOC_Os09g19560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g15550.3 |
| Rice Genome Annotation | LOC_Os02g15550.3 |
| Ricechip | LOC_Os02g15550.3 |
| KEGG | osa:4328910 dosa:Os02t0254700-01 |
| Entrez-Gene | 4328910 |