RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g15610.1 View Network Show in Genome Browser |
| Other Names | Os02g0255200 |
| Description | 40S ribosomal protein S15a, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 8766778-8769281 Nucleotide Length: 390 |
| Protein-coding | LOC_Os02g15610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10820 LOC_Os02g14059 LOC_Os02g01332 LOC_Os01g15290 LOC_Os02g06700 LOC_Os02g01230 LOC_Os01g42980 LOC_Os01g62210 LOC_Os01g42640 LOC_Os01g14830 LOC_Os01g04730 More.. |
| Downstream Genes | LOC_Os06g35730 LOC_Os05g11710 LOC_Os07g10660 LOC_Os03g04590 LOC_Os09g31180 LOC_Os08g10608 LOC_Os07g41750 LOC_Os09g17840 LOC_Os09g17830 LOC_Os10g32920 LOC_Os02g56960 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g15610.1 |
| Rice Genome Annotation | LOC_Os02g15610.1 |
| Ricechip | LOC_Os02g15610.1 |
| KEGG | osa:4328914 dosa:Os02t0255200-01 |
| Entrez-Gene | 4328914 |