RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g15900.1 View Network Show in Genome Browser |
| Other Names | Os02g0259600 |
| Description | 50S ribosomal protein L21, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 9005187-9007486 Nucleotide Length: 645 |
| Protein-coding | LOC_Os02g15900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g69950 LOC_Os01g48690 LOC_Os01g59060 LOC_Os01g54540 LOC_Os01g58470 LOC_Os02g09590 LOC_Os02g04460 LOC_Os01g50050 LOC_Os01g55890 LOC_Os01g44210 LOC_Os01g50760 More.. |
| Downstream Genes | LOC_Os04g25540 LOC_Os08g31228 LOC_Os08g31219 LOC_Os03g58540 LOC_Os07g47300 LOC_Os11g47800 LOC_Os08g06230 LOC_Os06g46450 LOC_Os12g17320 LOC_Os05g50550 LOC_Os03g55930 More.. |
| Reference | |
|---|---|
| PubMed | 21447055 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g15900.1 |
| Rice Genome Annotation | LOC_Os02g15900.1 |
| Ricechip | LOC_Os02g15900.1 |
| KEGG | osa:4328932 dosa:Os02t0259600-01 |
| Entrez-Gene | 4328932 |