RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g16620.1 View Network Show in Genome Browser |
| Other Names | Os02g0265900 |
| Description | reticulon domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 9497687-9500457 Nucleotide Length: 693 |
| Protein-coding | LOC_Os02g16620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61920 LOC_Os02g06340 LOC_Os01g53520 LOC_Os01g12650 LOC_Os01g54940 LOC_Os01g04640 LOC_Os02g03620 LOC_Os01g63240 LOC_Os01g64280 LOC_Os01g49660 LOC_Os01g67860 More.. |
| Downstream Genes | LOC_Os03g51900 LOC_Os07g06560 LOC_Os06g30750 LOC_Os02g55480 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395a |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g16620.1 |
| Rice Genome Annotation | LOC_Os02g16620.1 |
| Ricechip | LOC_Os02g16620.1 |
| KEGG | osa:4328956 dosa:Os02t0265900-01 |
| Entrez-Gene | 4328956 |