RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g16660.1 View Network Show in Genome Browser |
| Other Names | Os02g0266300 |
| Description | cbxX, chromosomal, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 9514333-9518285 Nucleotide Length: 1458 |
| Protein-coding | LOC_Os02g16660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05830 LOC_Os01g58020 |
| Downstream Genes | LOC_Os02g47760 LOC_Os03g21540 LOC_Os12g19470 LOC_Os12g19381 LOC_Os12g17600 LOC_Os02g55330 LOC_Os05g35330 LOC_Os11g32770 LOC_Os12g10580 LOC_Os09g37930 LOC_Os04g54380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g16660.1 |
| Rice Genome Annotation | LOC_Os02g16660.1 |
| Ricechip | LOC_Os02g16660.1 |
| KEGG | osa:4328960 dosa:Os02t0266300-01 |
| Entrez-Gene | 4328960 |