RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g16709.1 View Network Show in Genome Browser |
| Other Names | Os02g0267000 |
| Description | peptidase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 9544161-9550627 Nucleotide Length: 897 |
| Protein-coding | LOC_Os02g16709 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68120 LOC_Os02g06300 LOC_Os01g37050 LOC_Os02g11030 LOC_Os02g04170 LOC_Os01g56600 |
| Downstream Genes | LOC_Os03g02970 LOC_Os05g18850 LOC_Os10g34430 LOC_Os09g14610 LOC_Os06g25250 LOC_Os04g43050 LOC_Os04g01240 LOC_Os03g38740 LOC_Os06g05250 LOC_Os05g23260 LOC_Os08g10649 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g16709.1 |
| Rice Genome Annotation | LOC_Os02g16709.1 |
| Ricechip | LOC_Os02g16709.1 |
| KEGG | osa:4328965 dosa:Os02t0267000-01 |
| Entrez-Gene | 4328965 |