RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g17330.1 View Network Show in Genome Browser |
| Other Names | Os02g0273100 |
| Description | aminotransferase domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 9950654-9954960 Nucleotide Length: 1170 |
| Protein-coding | LOC_Os02g17330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15360 |
| Downstream Genes | LOC_Os05g48450 LOC_Os03g01600 LOC_Os10g40200 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00280 rn00290 rn00966 rn01100 rn01110 rn01210 rn00770 |
| Metacyc Pathways | PWY-5078 ILEUDEG-PWY ILEUSYN-PWY LEUSYN-PWY PWY-5076 LEU-DEG2-PWY PWY-3921 PWY-5057 PANTO-PWY VALDEG-PWY VALSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g17330.1 |
| Rice Genome Annotation | LOC_Os02g17330.1 |
| Ricechip | LOC_Os02g17330.1 |
| KEGG | osa:4328992 dosa:Os02t0273100-01 |
| Entrez-Gene | 4328992 |