RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g17500.1 View Network Show in Genome Browser |
| Other Names | Os02g0274900 |
| Description | transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 10074581-10081512 Nucleotide Length: 1446 |
| Protein-coding | LOC_Os02g17500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05710 |
| Downstream Genes | LOC_Os04g53190 LOC_Os03g59320 LOC_Os03g16334 LOC_Os03g40260 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR444a-3p.1 osa-miR444b.1 osa-miR444c.1 osa-miR444d.1 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn01100 rn01110 rn01120 |
| Metacyc Pathways | PWY-3801 P124-PWY PWY-622 GLUCONEO-PWY PWY-621 PWY-882 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g17500.1 |
| Rice Genome Annotation | LOC_Os02g17500.1 |
| Ricechip | LOC_Os02g17500.1 |
| KEGG | osa:4328999 dosa:Os02t0274900-02 |
| Entrez-Gene | 4328999 |