RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g19770.1 View Network Show in Genome Browser |
| Other Names | Os02g0300700 |
| Description | eukaryotic translation initiation factor 1A, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 11568248-11569114 Nucleotide Length: 429 |
| Protein-coding | LOC_Os02g19770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g14830 LOC_Os02g18380 LOC_Os01g04730 LOC_Os01g25610 LOC_Os02g01560 LOC_Os02g18550 LOC_Os02g05330 LOC_Os02g14059 LOC_Os01g19840 LOC_Os01g61814 LOC_Os02g13530 More.. |
| Downstream Genes | LOC_Os07g05580 LOC_Os07g12650 LOC_Os10g41470 LOC_Os03g02310 LOC_Os12g05430 LOC_Os03g38000 LOC_Os10g27190 LOC_Os03g18570 LOC_Os03g18580 LOC_Os03g10340 LOC_Os07g08330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g19770.1 |
| Rice Genome Annotation | LOC_Os02g19770.1 |
| Ricechip | LOC_Os02g19770.1 |
| KEGG | osa:4329091 dosa:Os02t0300700-01 |
| Entrez-Gene | 4329091 |