RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os02g20360.2 View Network Show in Genome Browser |
| Other Names | Os02g0306401 |
| Description | tyrosine aminotransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr2 CDS Coordinates (5'-3'): 11998063-12002633 Nucleotide Length: 1404 |
| Protein-coding | LOC_Os02g20360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08770 LOC_Os02g14110 LOC_Os02g07160 LOC_Os01g70380 LOC_Os01g70370 LOC_Os01g70360 LOC_Os01g53450 LOC_Os02g07490 |
| Downstream Genes | LOC_Os06g35540 LOC_Os10g42090 LOC_Os02g56300 LOC_Os10g11200 LOC_Os03g14800 LOC_Os11g31640 LOC_Os10g41150 LOC_Os06g19730 LOC_Os02g41670 LOC_Os02g41680 LOC_Os05g35290 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Reference | |
|---|---|
| PubMed | 18034312 |
| Database Links | |
|---|---|
| Gramene | LOC_Os02g20360.2 |
| Rice Genome Annotation | LOC_Os02g20360.2 |
| Ricechip | LOC_Os02g20360.2 |
| KEGG | osa:9267778 dosa:Os02t0306401-00 |
| Entrez-Gene | 9267778 |